A
Anton SC, Potts R, Aiello LC. 2014. Evolution of early homo: an integrated biological perspective. Science. 345(6192): 1236828
B
Bäckhed F, Ley RE, Sonnenburg JL, Peterson DA, Gordon JI. 2005. Host-bacterial mutualism in the human intestine. Science. 307(5717):1915–20
Badyaev AV, Uller T. 2009. Parental effects in ecology and evolution: mechanisms, processes and implications. Philosophical Transactions of the Royal Society B: Biological Sciences. 364(1520):1169–77
Bateson P. 1988. The active role of behaviour in evolution. In Evolutionary Processes and Metaphors, ed M-W Ho, SW Fox, pp. 191–207. Chichester: John Wiley & Sons
Bickerton D. 2009. Adam’s Tongue: How Humans Made Language, How Language Made Humans. New York: Hill & Wang
Bird A. 2002. DNA methylation patterns and epigenetic memory. Genes & Development. 16(1): 6–21
Boivin NL, Zeder MA, Fuller DQ, Crowther A, Larson G, et al. 2016. Ecological consequences of human niche construction: examining long-term anthropogenic shaping of global species distributions. PNAS. 113(23): 6388-96
Bonduriansky R. 2012. Rethinking heredity, again. Trends in Ecology & Evolution. 27(6):330–36
Bonduriansky R, Day T. 2018. Extended Heredity: A New Understanding of Inheritance and Evolution. Princeton: Princeton University Press
Boni MF, Feldman MW. 2005. Evolution of antibiotic resistance by human and bacterial niche construction. Evolution. 59(3): 477–91
Boogert NJ, Laland KN, Paterson DM. 2006. The implications of niche construction and ecosystem engineering for conservation biology. Bioscience. 56(7): 570–78
Bråthen KA, Ravolainen VT. 2015. Niche construction by growth forms is as strong a predictor of species diversity as environmental gradients. Journal of Ecology. 103(3):701–13
Brodie ED. 2005. Caution: niche construction ahead. Evolution. 59(1): 249–251
Buser CC, Newcomb RD, Gaskett AC, Goddard MR. 2014. Niche construction initiates the evolution of mutualistic interactions. Ecology letters. 17(10): 1257-1264
C
Callahan BJ, Fukami T, Fisher DS. 2014. Rapid evolution of adaptive niche construction in experimental microbial populations. Evolution. 68(11): 3307-3316
Caro G, et al. 2014. Impact of soil engineering by two contrasting species of earthworms on their dispersal rates. Applied Soil Ecology. 84: 223-230
Cavalli-Sforza LL, Feldman MW. 1989. On the theory of evolution under genetic and cultural transmission, with application to the lactose absorption problem. In Mathematical Evolutionary Theory, ed MW Feldman, pp. 145–73. Princeton: Princeton University Press
Chaitin GJ. 1987. Algorithmic Information Theory: Cambridge Tracts in Theoretical Computer Science 1. Cambridge: Cambridge University Press
Chase JM, Leibold MA. 2003. Ecological Niches. Linking Classical and Contemporary Approaches. Chicago: University of Chicago Press
Chisholm RH, Connelly BD, Kerr B, Tanaka MM. 2018. The role of pleiotropy in the evolutionary maintenance of positive niche construction. American Naturalist. 192(1): 35-48
Chisolm RH, et al. 2016. Controlled fire use in early humans might have triggered the evolutionary emergence of tuberculosis. PNAS. 113(32): 9051–56
Chiu L, Gilbert SF. 2015. The birth of the holobiont: multi-species birthing through mutual scaffolding and niche construction. Biosemiotics. 8(2): 191-210
Clark AD, Deffner D, Laland K, Odling-Smee J, Endler J. 2020. Niche construction affects the variability and strength of natural selection. The American Naturalist. 195(1):16-30
Clements FE. 1916. Plant Succession: An Analysis of the Development of Vegetation. Washington DC: Carnegie Institute
Collard M, Buchanan B, Ruttle A, O’Brien MJ. 2012. Niche construction and the toolkits of hunter–gatherers and food producers. Biology Theory. 6(3): 251–259
Crain CM, Bertness MD. 2006. Ecosystem engineering across environmental gradients: implications for conservation and management. BioScience. 56(3): 211–218
Creanza N, Fogarty L, Feldman MW. 2012. Models of cultural niche construction with selection and assertive mating. PLoS ONE. 7(8):e42744
Creanza N, Kolodny O, Feldman MW. 2017. Cultural evolutionary theory: how culture evolves and why it matters. PNAS. 114:7782-7789
Creanza N, Feldman MW. 2014. Complexity in models of cultural niche construction with selection and homophily. PNAS. 111(Supplement 3):10830–37
Creanza N, Feldman MW. 2016. Worldwide genetic and cultural change in human evolution. Current Opinion in Genetics and development. 41: 85-92
Crooks JA, Khim HS. 1999. Architectural vs. biological effects of a habitat-altering, exotic mussel Musculista senhousia. Journal of Experimental Marine Biology and Ecology. 240(1): 53–75
D
Danchin É, Charmantier A, Champagne FA, Mesoudi A, Pujol B, Blanchet S. 2011. Beyond DNA: integrating inclusive inheritance into an extended theory of evolution. Nature Reviews Genetics.12(7):475–86
Darwin C. 1851. The Structure and Distribution of Coral Reefs. California: University of California Press
Darwin C. 1881. The Formation of Vegetable Mould through the Action of Worms, with Observations on their Habits. London: Murray
Dawkins R. 1982. The Extended Phenotype. New York: Freeman Press
Dawkins R. 2004. Extended phenotype – But not too extended. A reply to Laland, Turner and Jablonka. Biology & Physiology. 19(3): 377–96
Day RL, Laland KN, Odling-Smee J. 2003. Rethinking adaptation – the niche-construction perspective. Perspectives in Biology and Medicine. 46(1): 80-95
Dedeine F, Vavre F, Fleury F, Loppin B, Hochberg ME, Boulétreau M. 2001. Removing symbiotic Wolbachia bacteria specifically inhibits oogenesis in a parasitic wasp. PNAS. 98(11):6247–52
Donohue K. 2013. Why ontogeny matters during adaptation: developmental niche construction and pleiotropy across the life cycle in arabidopsis thaliana. Evolution. 68(1): 32-47
Donohue K. 2005. Niche construction through phenological plasticity: life history dynamics and ecological consequences. New Phytologist Trust. 166(1): 83– 92
Duckworth RA. 2009. The role of behavior in evolution: a search for mechanism. Evolutionary Ecology. 23(4): 513-531
Durham WH. 1991. Coevolution: Genes, Culture and Human Diversity. California: Stanford University Press
Dussourd DE, Ubik K, Harvis C, Resch J, Meinwald J, Eisner T. 1988. Biparental defensive endowment of eggs with acquired plant alkaloid in the moth Utetheisa ornatrix. PNAS. 85(16):5992–96
Dyken JDV, Wade MJ. 2012. Origins of altruism diversity II: runaway coevolution of altruistic strategies via reciprocal niche construction. Evolution. 66(8): 498–2513
E
Ehlers A, Worm B, Reusch TBH. 2008. Importance of genetic diversity in eelgrass Zostera marina for its resilience to global warming. Marine Ecology Progress Series. 355: 1–7
Ellis EC. 2015. Ecology in an anthropogenic biosphere. Ecological Monographs. 85(3):287–331
Ellis EC. 2018. Anthropocene. A Very Short Introduction. Oxford: Oxford University Press
Erwin DH . 2005. Seeds of diversity. Science. 308(5729):1752–1753
Erwin DH . 2008. Macroevolution of ecosystem engineering, niche construction and diversity. Trends in Ecology & Evolution. 23(6): 304–310
F
Flynn EG, Laland KN, Kendal RK, Kendal JR. 2013. Developmental niche construction. Developmental Science. 16(2): 296-313
Fogarty L, Creanza N. 2017. The niche construction of cultural complexity: interactions between innovations, population size and the environment. Philosophical Transactions Royal Society B. 372(1735): 20160428
Fogel BM, Crain CM, Bertness MD. 2004. Community level engineering effects of Triglochin maritima (seaside arrowgrass) in a salt marsh in northern New England, USA. Journal of Ecology. 92(4): 589-97
Foote AD, Vijay N, Ávila-Arcos MC, Baird RW, Durban JW, et al. 2016. Genome-culture coevolution promotes rapid divergence of killer whale ecotypes. Nature Communications. 7: 11693
Fortune IS, Paterson DM. 2020. Ecological best practice in decommissioning: a review of scientific research. ICES Journal of Marine Science. 77(3): 1079-91
Frelich LE, et al. 2019. Side-swiped: ecological cascades emanating from earthworm invasions. Frontiers in Ecology and the Environment. 17(9):502-10
Fuentes A. 2009. Evolution of Human Behavior. Oxford, UK: Oxford University Press
Fuentes A. 2017. The Creative Spark: How Imagination Made Humans Exceptional. London: Penguin
Fussman GF, Loreau M, Abrams PA. 2007. Eco-evolutionary dynamics of communities and ecosystems. Functional Ecology. 21(3): 465-77
G
Gerbault P, Liebert A, Itan Y, Powell A, Currat M, et al. 2011. Evolution of lactase persistence: an example of human niche construction. Philosophical Transactions of the Royal Society B: Biological Sciences. 366(1566):863–77
Gilbert C, Maho YL, Perret M, Ancel A. 2007. Body temperature changes induced by huddling in breeding male emperor penguins. American Journal of Physiology-Regulatory, Integrative and Comparative Physiology. 292(1):R176–85
Gilbert SF, Sapp J, Tauber AI. 2012. A symbiotic view of life: we have never been individuals. Quarterly Review Biology. 87(4): 325-341
Gilbert SF, Bosch TCG, Ledón-Rettig C. 2015. Eco-Evo-Devo: developmental symbiosis and developmental plasticity as evolutionary agents. Nature Reviews Genetics. 16(10):611–22
Gilbert SF. 2020. Developmental symbiosis facilitates the multiple origins of herbivory. Evolution and Development 22(1-2): 154-64
Gilbert SF, Epel D. 2009. Ecological developmental biology. Integrating Epigenetics, medicine and Evolution. Sunderland, MA : Sinauer
Godfrey-Smith P. 1996. Complexity and the Function of Mind in Nature. Cambridge: Cambridge University Press
Goldstone JV, Hamdoun A, Cole BJ, et al. 2006. The chemical defensome: environmental sensing and response genes in the Strongylocentrotus purpuratus genome. Developmental Biology. 300(1): 366-84
Gould SJ, Lewontin R. 1979. The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme. Proceedings of the Royal Society of London. Series B. Biological Sciences. 205(1161):581–98
Griffiths PE, Gray RD. 2001. Darwinism and developmental systems. In Cycles of Contingency: Developmental Systems and Evolution, ed S Oyama, P Griffiths, RD Gray, pp. 195–218. Cambridge, Massachusetts: The MIT Press
Griffiths PE, Gray RD. 2004. The developmental systems perspective. In Phenotypic Integration: Studying the Ecology and Evolution of Complex Phenotypes, ed M Pigliucci, K Preston, pp. 409–30. Oxford, New York: Oxford University Press
Gurney WSC, Lawton JH. 1996. The population dynamics of ecosystem engineers. Oikos. 76(2): 273–283
H
Hall BK. 2012. Evolutionary developmental biology Evo-Devo: past, present and future. Evolution Education and Outreach. 5(2): 184-93
Hamblin SR, White PA, Tanaka MM. 2014. Viral niche construction alters hosts and ecosystems at multiple scales. Trends in Ecology & Evolution. 29(11): 594-9
Hansell MH. 1993. The ecological impact of animal nests and burrows. Functional Ecology. 7(1): 5–12
Helanterä H, Uller T. 2019. The causes of a major transition: how social insects traverse Darwinian space. In Evolutionary Causation: Biological and Philosophical Reflections, ed. T Uller, KN Laland, pp. 173- 96. Cambridge, MA: MIT Press
Hooper LV, Wong MH, et al. 2001. Molecular analysis of commensal host–microbial relationships in the intestine. Science. 291(5505): 881–84
Hoppitt W, Laland KN. 2013. Social learning: An Introduction to Mechanisms, Methods, and Models. Princeton: Princeton University Press
Hutchinson GE 1957 Concluding remarks. Cold Spring Harbor Symposia on Quantitative Biology. 22:415-27
I
Ihara Y, Feldman MW. 2004. Cultural niche construction and the evolution of small family size. Theoretical Popular Biology. 65(1):101–111
J
Jablonka E, Lamb MJ. 2005. Evolution In Four Dimensions. Cambridge, MA: MIT Press
Jablonka E, Lamb MJ. 2014. Evolution In Four Dimensions. Revised edition. Cambridge, MA: MIT Press
Jackson ISC. 2020. Developmental bias in the fossil record. Evolution & Development. 22(1-2): 88-102
Jones CG, Lawton JH, Shachak M. 1994. Organisms as ecosystem engineers. Oikos. 69(3): 373-86
Jones CG, Lawton JH. 1995. Linking Species and Ecosystems. New York: Chapman and Hall
Jones CG, Lawton JH, Shachak M. 1997. Positive and negative effects of organisms as physical ecosystem engineers. Ecology. 78: 1946-1957
Jones CG, Shachak M. 1990. Fertilization of desert soil by rock-eating snails. Nature. 346(6287):839–841
K
Kamra DN. 2005. Rumen microbial ecosystem. Current Science. 89(1):124–35
Kendal J, Tehrani JJ, Odling-Smee FJ. 2011. Human niche construction in interdisciplinary focus. Philosophical Transactions of the Royal Society B: Biological Sciences. 366(1566):785–92
Kirschner MW, Gerhart JC. 2005. The Plausibility of Life: Resolving Darwin’s Dilemma. New Haven, CT: Yale University Press
Krakauer DC, Page KM, Erwin DH. 2009. Diversity, dilemmas, and monopolies of niche construction. The American Naturalist. 173(1):26–40
Kylafis G, Loreau M. 2011. Niche construction in the light of niche theory. Ecology Letters. 14(2): 82–90
Kylafis G, Loreau M. 2008. Ecological and evolutionary consequences of niche construction for its agent. Ecology Letters. 11(10):1072–81
L
La Reau AJ, Suen G. 2018. The Ruminococci: key symbionts
of the gut ecosystem. Journal of Microbiology. 56(3): 199–208
Laidre ME. 2012. Niche construction drives social dependence in hermit crabs. Current Biology. 22(20): R861-R863
Laidre ME. 2019. Architectural modification of shells by terrestrial hermit crabs alters social dynamics in later generations. Ecology. 100(9): e02767
Laland KN. 2017. Darwin’s Unfinished Symphony. How Culture Made the Human Mind. Princeton: Princeton University Press
Laland KN, Odling-Smee FJ, Feldman MW. 1996. The evolutionary consequences of niche construction: a theoretical investigation using two‐locus theory. Journal of Evolutionary Biology. 9(3): 293–316
Laland KN, Odling-Smee FJ, Feldman MW. 1999. Evolutionary consequences of niche construction and their implications for ecology. PNAS. 96(18):10242–47
Laland KN, Odling‐Smee J, Feldman MW. 2001. Cultural niche construction and human evolution. Journal of Evolutionary Biology. 14(1):22–33
Laland KN, Odling-Smee FJ, Gilbert SF. 2008. EvoDevo and niche construction: building bridges. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution. 310B(7):549–66
Laland KN, Odling-Smee J, Myles S. 2010. How culture shaped the human genome: bringing genetics and the human sciences together. Nature Reviews Genetics. 11(2):137–48
Laland KN, Sterelny K, Odling-Smee FJ, Hoppitt W, Uller T. 2011. Cause and effect in biology revisited: is Mayr’s proximate-ultimate dichotomy still useful? Science. 334(6062):1512–16
Laland KN, Odling-Smee FJ, Hoppitt W, Uller T. 2012. More on how and why: cause and effect in biology revisited. Biology & Philosophy. 28(5):719–45
Laland KN, Uller T, Feldman MW, et al. 2014. Does evolutionary theory need a rethink? Yes, urgently. Nature. 514(7521): 161–164
Laland KN, Uller T, Feldman MW, Sterelny K, Müller GB, et al. 2015. The extended evolutionary synthesis: its structure, assumptions and predictions. Proc. R. Soc. B. 282(1813):20151019
Laland KN, Odling-Smee FJ, Feldman MW. 2019. Understanding niche construction as an evolutionary process. In Evolutionary Causation: Biological and Philosophical Reflections, ed. T Uller, KN Laland, pp. 127–52. Cambridge, MA: MIT Press
Laland KN, Toyokawa W, Oudman T. 2020. Animal learning as a source of developmental bias. Evolution & Development. 22(1–2):126–42
Laland KN, Boogert NJ. 2010. Niche construction, co-evolution and biodiversity. Ecological Economics. 69(4): 731–736
Laland KN, Sterelny K. 2006. Seven reasons (not) to neglect niche construction. Evolution. 60(9):1751–62
Lansing JS, Cox MP, Downey SS, Janssen M, Schoenfelder J. 2009. A robust budding model of Balinese water temple networks. World archaeology. 41(1):112–33
Lansing JS, Fox KM. 2011. Niche construction on Bali: the gods of the countryside. Philosophical Transactions of the Royal Society B: Biological Sciences. 366(1566):927–34
Lehmann L. 2007. The evolution of trans-generational altruism: kin selection meets niche construction. Journal of Evolutionary Biology. 20(1):181–189
Lehmann L. 2008. The adaptive dynamics of niche constructing traits in spatially subdivided populations: Evolving posthumous extended phenotypes. Evolution. 62(3):549–66
Lev-Yadun S, Katzir G, Ne’eman G. 2009. Rheum palaestinum, a self-irrigating desert plant. Naturwissenschaften 96(3): 393-397
Levins R, Lewontin RC. 1985. The Dialectical Biologist. Cambridge: Harvard University Press
Levis NA, Pfennig DW. 2020. Plasticity-led evolution: A survey of developmental mechanisms and empirical tests. Evolution & Development. 22(1–2):71–87
Lewontin R. 1970. The units of selection. Annual Review of Ecology and Systematics. 1(1):1–18
Lewontin R. 1982. Organism and environment. In Learning, Development and Culture, ed HC Plotkin, pp. 151–170. Chichester: Wiley
Lewontin R. 1983. Gene, organism, and environment. In Evolution: From Molecules to Men, ed DS Bendall, pp. 273–85. Cambridge: Cambridge University Press
Lewontin RC. 2000. The Triple Helix: Gene, Organism, and Environment. Cambridge: Harvard University Press
Ley RE, Peterson DA, Gordon JI. 2006. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell. 124(4): 837–48
Lill JT, Marquis RJ. 2003. Ecosystem engineering by caterpillars increases insect herbivore diversity on white oak. Ecology. 84(3): 682–690
Lombardo, et al. 2020. Early Holocene crop cultivation and landscape modification in Amazonia. Nature. 581(7807): 190-93
Longcamp, A, Draghi, J. 2023. Evolutionary rescue via niche construction: infrequent construction can prevent post-invasion extinction. Theoretical Population Biology. 153: 37-49
M
Matthews B, De Meester L, Jones CG, Iberlings BW, et al. 2014. Under niche construction: an operational bridge between ecology, evolution and ecosystem science. Ecological Monographs. 84(2): 245–263
Mayr E. 1961. Cause and effect in biology: kinds of causes, predictability, and teleology are viewed by a practicing biologist. Science. 134(3489):1501–6
Mayr E. 1980. Prologue: some thoughts on the history of the evolutionary synthesis. In The Evolutionary Synthesis: Perspectives on the Unification of Biology, ed E Mayr, W Provine, pp. 1–48. Cambridge: Harvard University Press
Mayr E. 1984. The triumph of the evolutionary synthesis. Times Literary Supplement 2 November, pp. 1261–1262
McFall‐Ngai MJ, Ruby EG. 1991. Symbiont recognition and subsequent morphogenesis as early events in an animal‐bacterial mutualism. Science. 254(5037): 1491–94
Montgomery MK, McFall‐Ngai M. 1994. Bacterial symbionts induce host organ morphogenesis during early postembryonic development of the squid Euprymna scolopes. Development. 120(7):1719–29
Morgan LH. 1868. The American Beaver and His Works. Philadelphia, PA: JB Lippincott
N
Naiman RJ, Johnston CA, Kelley JC. 1988. Alteration of North American streams by beaver. BioScience. 38(11): 753-62
Nyholm SV, Stabb EV, Ruby EG, et al. 2000. Establishment of an animal‐bacterial association: recruiting symbiotic vibrios from the environment. PNAS. 97(18): 10231–35
O
O’Brien M, Laland KN. 2012. Genes, culture and agriculture: an example of human niche construction. Current Anthropology. 53(4): 434-70
Odling-Smee FJ. 1988. Niche-constructing phenotypes. In The Role of Behavior in Evolution, ed HC Plotkin, pp. 73–132. Cambridge: The MIT Press
Odling-Smee FJ. 2010. Niche inheritance. In Evolution: The Extended Synthesis, ed M Pigliucci, G Müller, pp. 175–208. Cambridge: The MIT Press
Odling-Smee FJ, Laland KN, Feldman MW. 1996. Niche construction. The American Naturalist. 147(4):641–48
Odling-Smee FJ, Laland KN, Feldman MW. 2003. Niche Construction: The Neglected Process in Evolution. Princeton: Princeton University Press
Odling-Smee FJ, Erwin DH, Palkovacs EP, Feldman MW, Laland KN. 2013. Niche construction theory: a practical guide for ecologists. The Quarterly Review of Biology. 88(1):3–28
Odling-Smee J, Laland KN. 2012. Ecological inheritance and cultural inheritance: what are they and how do they differ? Biological Theory 6(3): 220–30
Oudman T, Laland K, Ruxton G, Tombre I, Shimmings P, Prop J. 2020. Young birds switch but old birds lead: how barnacle geese adjust migratory habits to environmental change. Frontiers in Ecology and Evolution. 7:502
Oyama S. 1985. The Ontogeny of Information: Developmental Systems and Evolution. Duke University Press. 2nd ed.
Oyama S, Griffiths P, Gray RD, eds. 2001. Cycles of Contingency: Developmental Systems and Evolution. Cambridge: The MIT Press
P
Peterson, J.V., Thornburg, A.M., Kissel, M. et al. Semiotic Mechanisms Underlying Niche Construction. Biosemiotics 11, 181–198 (2018). https://doi.org/10.1007/s12304-018-9323-1
Pigliucci M, Müller G, eds. 2010. Evolution: The Extended Synthesis. Cambridge: The MIT Press
Piperno DR. 2017. Assessing elements of an extended evolutionary synthesis for plant. PNAS. 114(25): 6429-6437
Post DM, Palkovacs EP. 2009. Eco-evolutionary feedbacks in community and ecosystem ecology: interactions between the ecological theatre and the evolutionary play. Philosophical Transactions of the Royal Society B: Biological Sciences. 364(1523):1629–40
Pringle RM. 2008. Elephants as agents of habitat creation for small vertebrates at the patch scale. Ecology. 89(1): 26–33
Q
Quintus S, Cochrane EE. 2018. The prevalence and importance of niche construction in agricultural development in Polynesia. Journal of Anthropological Archaeology. 51:173–86
R
Ren X, Lemoine X, Mo D, Kidder TR, Guo Y, et al. 2016. Foothills and intermountain basins: does China’s fertile arc have ‘hilly flanks’? Quaternary International. 426: 86-96
Roughgarden J, Gilbert SF, Rosenberg E, Zilber-Rosenberg I, Lloyd EA. 2018. Holobionts as units of selection and a model of their population dynamics and evolution. Biological Theory. 13(1): 44-65
Round JL, Mazmanian SK. 2009. The gut microbiota shapes intestinal immune responses during health and disease. Nature Reviews Immunology. 9(5): 313–23
S
San Roman M, Wagner A. 2018. An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment. PLoS computational biology. 14:(7): e1006340
Schrödinger E. 1944. Reprinted 1967. What is Life? and Mind and Matter. Cambridge: Cambridge University Press
Schwab DB, Riggs HE, Newton ILG, Moczek AP. 2016. Developmental and ecological benefits of the maternally transmitted microbiota in a dung beetle. The American Naturalist. 188(6): 679-82
Schwab DB, Casasa S, Moczek AP. 2017. Evidence of developmental niche construction in dung beetles: effects on growth, scaling and reproductive success. Ecology Letters. 20(11): 1353–63
Schwilk D. 2003. Flammability is a niche construction trait: canopy architecture affects fire intensity. The American Naturalist. 162(6): 725-33
Scott-Phillips TC, Laland KN, Shuker DM, Dickins TE, West SA. 2014. The niche construction perspective: a critical appraisal. Evolution. 68(5): 1231-43
Sender R, Fuchs S, Milo R. 2016. Revised estimates for the number of human and bacteria cells in the body. PLoS Biology. 14(8): e1002533
Shachak M, Jones CG, Granot Y. 1987. Herbivory in rocks and weathering of a desert. Science. 236(4805): 1098-99
Shaler N. 1892. Effects of animals and plants on soils. In Origin and Nature of Soils. 12th Annual Report, Director US Geol. Survey, Part J. Geology Annual Report, Sector of the Interior. Washington: Government Printing Office
Silver M, Di Paolo EA. 2006. Spatial effects favour the evolution of niche construction. Theoretical population Biology. 70(4): 387-400
Smith BD. 2007a. Niche construction and the behavioral context of plant and animal domestication. Evolutionary Anthropology. 16(5): 188–99
Smith BD. 2007b. The ultimate ecosystem engineers. Science. 315(5820): 1797-98
Smith BD. 2016. Neo-Darwinism, niche construction theory, and the initial domestication of plants and animals. Evolutionary Ecology. 30(2): 307–24
Smith BD. 2011. A cultural niche construction theory of initial domestication. Biological Theory. 6(3): 260-71
Smith BD. 2011. The cultural context of plant domestication in Eastern North America. Current Anthropology. 52(S4): S471-S484
Smith BD. 2012. A cultural niche construction theory of initial domestication. Biological Theory. 6(3): 260-71
Smith BD, Zeder MA. 2013. The onset of the anthropocene. Anthropocene. 2013(4): 8-13
Sober E. 1984. The Nature of Selection: Evolutionary Theory in Philosophical Focus. Cambridge: MIT Press
Spencer TE, Burhardt RC, Johnson GA, Bazer FW. 2004. Conceptus signals for establishment and maintenance of pregnancy. Animal Reproductive Science. 82(1): 537–50
Stappenbeck TS, Hooper LV, Gordon JI. 2002. Developmental regulation of intestinal angiogenesis by indigenous microbes via Paneth cells. PNAS. 99(24): 15451–55
Sterelny K. 2001. Niche construction, developmental systems, and the extended replicator. In Cycles of Contingency: Developmental Systems and Evolution, ed. Oyama, et al eds. Cambridge: MIT Press
Sultan SE. 2015. Organism & Environment: Ecological Development, Niche Construction, and Adaptation. Oxford: Oxford University Press
T
Tanaka MM, Godfrey-Smith P, Kerr B. 2020. The dual landscape model of adaptation and niche construction. Philosophy of Science. DOI: 10.1086/708692
Ten Cate C. 2000. How learning mechanisms might affect evolutionary processes. Trends in Ecology & Evolution. 15(5): 179–81
Thorogood R, Davies NB. 2012. Cuckoos combat socially transmitted defenses of reed warbler hosts with a plumage polymorphism. Science. 337(6094): 578–80
Ticconi C, Belmonte A, Piccione E, Rao CH. 2006. Feto-placental communication system with the myometrium inpregnancy and parturition: the role of hormones, neuro- hormones, inflammatory mediators, and locally active factors. The Journal of Maternal Fetal and Neonatal Medicine. 19(3): 125–33
Tomlinson G. 2018. Culture and The Course of Human Evolution. Chicago: Chicago University Press
Tomlinson G. 2015. A Million Years of Music: The Emergence of Human Modernity. The Emergence of Human Modernity. New York: Zone books
Turner JS. 2000. The Extended Organism: The Physiology of Animal-built Structures. Cambridge: Harvard University Press
U
Uller T, Feiner N, Radersma R, Jackson ISC, Rago A. 2020. Developmental plasticity and evolutionary explanations. Evolution and Development. 22(1-2): 47-55
Uller T, Helanterä H. 2020. Heredity and evolutionary theory. In Challenging the Modern Synthesis: Adaptation, Development, and Inheritance, eds. P Huneman, DM Walsh, pp. 352. New York: Oxford University Press
Uller T, Helanterä H. 2019. Niche construction and conceptual change in evolutionary biology. British Journal for the Philosophy of Science. 70(2): 351-75
W
Waddington CH. 1957. The Strategy of the Genes: A Discussion of Some Aspects of Theoretical Biology. Oxon: Routledge
Waddington CH. 1959. Evolutionary systems: animal and human. Nature. 183:1634-38
Walsh DM. 2015. Organism, Agency and Evolution. Cambridge: Cambridge University Press
Walsh DM. 2019. The Paradox of Population Thinking: First Order Causes and Higher Order Effects.In Evolutionary Causation: Biological and Philosophical Reflections, ed. T Uller, KN Laland, pp.227-46. Cambridge, MA: MIT Press
Ware IM, Fitzpatrick CR, Senthilnathan A, Bayliss SLJ, Beals KK, et al. 2019. Feedbacks link ecosystem ecology and evolution across spatial and temporal scales: Empirical evidence and future directions. Functional Ecology. 33(1):31–42
Waters CN, Zalasiewicz J, Summerhayes C, Barnosky AD, Poirier C, et al. 2016. The Anthropocene is functionally and stratigraphically distinct from the Holocene. Science. 351(6269): aad2622
West-Eberhard MJ. 2003. Developmental Plasticity and Evolution. Oxford: Oxford University Press
Whitehead H, Laland KN, Rendell L, Thorogood R, Whiten A. 2019. The reach of gene-culture coevolution in animals. Nature Communications. 10: 2405
Williams GC. 1966. Adaptation and Natural Selection: A Critique of Some Current Evolutionary Thought. Princeton: Princeton University Press
Williams GC. 1992. Gaia, nature worship, and biocentric fallacies. Quarterly Review of Biology. 67(4): 479-86
Williams JB, Lee Jr RE. 2005. Plant senescence cues entry into diapause in the gall fly Eurosta solidaginis: resulting metabolic depression is critical for water conservation. Journal of Experimental Biology. 208:4437–44
Wolf JB, Brodie III ED, Cheverud JM, Moore AJ, Wade MJ. 1998. Evolutionary consequences of indirect genetic effects. Trends in Ecology & Evolution. 13(2): 64–69
Wray GA, Hoekstra HE, Futuyma DJ, Lenski RE, et al. 2014. Does evolutionary theory need a rethink? No, all is well. Nature. 514(7521): 161-64
Wright JP, Jones CJ, Flecker AS. 2002. An ecosystem engineer, the beaver, increases species richness at the landscape scale. Oecologia. 132(1): 96-101
X
Xue C, Liu Z, Goldenfeld N. 2020. Scale-invariant topology and bursty branching of evolutionary trees emerge from niche construction. PNAS. 117(14): 7879–87
Xu J, Gordon JI. 2003. Honor thy symbionts. PNAS. 100(18):10452–59
Z
Zeder MA. 2012. The broad spectrum revolution at 40: resource diversity, intensification, and an alternative to optimal foraging explanations. Journal of Anthropological Archaeology. 31(3): 241-64
Zeder MA. 2015. Core questions in domestication research. PNAS. 112(11): 3191-98
Zeder MA. 2017. Domestication as a model system for the extended evolutionary synthesis. Interface Focus. 7(5): 2016013
Zeder MA. 2018. Why evolutionary biology needs anthropology: evaluating core assumptions of the extended evolutionary synthesis. Evolutionary Anthropology. 27(6): 267-84
Zeder MA, Smith BD. 2009. A conversation on agriculture: talking past each other in a crowded room. Current Anthropology. 50(5): 681–91
Zeder MA. 2017. Domestication as a model system for the extended evolutionary synthesis. Interface Focus. 7(5): 20160133
